torchcell.datamodels.schema.PseudobulkExpressionExperiment

class PseudobulkExpressionExperiment(*, experiment_type: str = 'pseudobulk_expression', dataset_name: str, genotype: Genotype | list[Genotype], environment: Environment, phenotype: PseudobulkExpressionPhenotype)[source]

Bases: Experiment, ModelStrict

Experiment measuring a pseudobulk single-cell (Perturb-seq) expression phenotype.

model_config: ClassVar[ConfigDict] = {'extra': 'forbid', 'frozen': True}

Configuration for the model, should be a dictionary conforming to [ConfigDict][pydantic.config.ConfigDict].