torchcell.datamodels.schema.PseudobulkExpressionExperiment
- class PseudobulkExpressionExperiment(*, experiment_type: str = 'pseudobulk_expression', dataset_name: str, genotype: Genotype | list[Genotype], environment: Environment, phenotype: PseudobulkExpressionPhenotype)[source]
Bases:
Experiment,ModelStrictExperiment measuring a pseudobulk single-cell (Perturb-seq) expression phenotype.
- model_config: ClassVar[ConfigDict] = {'extra': 'forbid', 'frozen': True}
Configuration for the model, should be a dictionary conforming to [ConfigDict][pydantic.config.ConfigDict].